BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022D06LP1|AL427895
(600 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1737 1113 0.0
>3x_Contig1737
Length = 17214
Score = 1113 bits (550), Expect = 0.0
Identities = 579/600 (96%)
Strand = Plus / Plus
Query: 1 cttawgttcactgatactggagagtcatatattcaggcaacaccatttcaggaatccagc 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14945 cttaagttcactgatactggagagtcatatattcaggcaacaccatttcaggaatccagc 15004
Query: 61 ttccaaatagcgttacagagtaacttaaagtacaagtgtcaattctcaaaataacatggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15005 ttccaaatagcgttacagagtaacttaaagtacaagtgtcaattctcaaaataacatggt 15064
Query: 121 atcttaaaagtacgtaactccaatgcaactttcacattctatgatgattcaactcaataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15065 atcttaaaagtacgtaactccaatgcaactttcacattctatgatgattcaactcaataa 15124
Query: 181 tcttagatggcatacctagtatcgctaatacagatccaatgaagcttataavamgaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 15125 tcttagatggcatacctagtatcgctaatacagatccaatgaagcttataaaaagaattt 15184
Query: 241 aaactgtttagaatgatatatttvctatgaggcggtgcataagaactttttctcagacaa 300
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 15185 aaactgtttagaatgatatatttactatgaggcggtgcataagaactttttctcagacaa 15244
Query: 301 ttagctcatctaattgavacctgatgcagaagtgaaaagvaggacatatatvabbscctc 360
||||||||||||||||| ||||||||||||||||||||| ||||||||||| | ||||
Sbjct: 15245 ttagctcatctaattgaaacctgatgcagaagtgaaaagaaggacatatataatttcctc 15304
Query: 361 attgtttagagctgctgtagtcattggctgaatagtaatgattatatygtbttgctatat 420
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 15305 attgtttagagctgctgtagtcattggctgaatagtaatgattatattgttttgctatat 15364
Query: 421 katcaagtkatcggtgaattaagacatttcattggtttcaggtaaggcggacgagagava 480
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 15365 tatcaagttatcggtgaattaagacatttcattggtttcaggtaaggcggacgagagaaa 15424
Query: 481 gttattaabcatyatcagasaaccataaatcttggcgttcactatcttggtcggacctct 540
|||||||| ||| || ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 15425 gttattaatcattataagaaaaccataaatcttggcgttcactatcttggtcggacctct 15484
Query: 541 tattggttgavaccgacccatcttaccttcgtgatatcaaagtgcaaacgaaacatctaa 600
|||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 15485 tattggttgaaaccgacccatcttaccttcgtgatatcaaagtgcaaacgtaacatctaa 15544
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.713 1.33
Gapped
Lambda K H
1.40 0.713 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3099
Number of Sequences: 1807
Number of extensions: 3099
Number of successful extensions: 65
Number of sequences better than 1.0e-20: 1
length of query: 600
length of database: 10,358,551
effective HSP length: 16
effective length of query: 584
effective length of database: 10,329,639
effective search space: 6032509176
effective search space used: 6032509176
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.8 bits)
S2: 49 (99.6 bits)